chenqingwang 3 лет назад
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1 измененных файлов: 5 добавлений и 5 удалений
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      README.md

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README.md Просмотреть файл

@@ -21,9 +21,9 @@ For RNA-seq data, from bams to AS Information files.
$ source activate choppy (open-choppy-env)

# 第一次安装
$ choppy install chenqingwang/spladder-single
$ choppy install chenqingwang/SplAdder-single
# 非第一次安装
$ choppy install chenqingwang/spladder-single -f
$ choppy install chenqingwang/SplAdder-single -f

# 查询已安装APP
$ choppy apps
@@ -33,12 +33,12 @@ $ choppy apps

```
# 准备 samples.csv 文件
$ choppy samples chenqingwang/spladder-single-latest > samples.csv
$ choppy samples chenqingwang/SplAdder-single-latest > samples.csv
# 准备无默认参数的samples.csv 文件
choppy samples --no-default chenqingwang/spladder-single-latest > samples.csv
choppy samples --no-default chenqingwang/SplAdder-single-latest > samples.csv

# 提交任务
$ choppy batch chenqingwang/spladder-single-latest samples.csv -p Your_project_name -l Your_label
$ choppy batch chenqingwang/SplAdder-single-latest samples.csv -p Your_project_name -l Your_label

# 查询任务运行状况
$ choppy query -L Your_label | grep "status"

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