更新 'tasks/spladder.wdl'

tasks/spladder.wdl

@@ -19,17 +19,13 @@ task spladder {
                   
         for i in ${sep=" " bam}
 		do
-        echo $i >> bam.txt
+        echo $i >> alignment.txt
 		done                  
 
-        sed ':a ; N;s/\n/,/ ; t a ; ' bam.txt > alignment.txt
-          
         for i in ${sep=" " bai}
 		do
-        echo $i >> bai.txt
+        echo $i >> alignment_bai.txt
 		done                  
-
-        sed ':a ; N;s/\n/,/ ; t a ; ' bai.txt > alignment_bai.txt
           
         for i in ${sep=" " pickle}
 		do