共有 1 个文件被更改，包括 1 次插入 和 1 次删除
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tasks/spladder_merge.wdl
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| mkdir -p ${sample_id}/spladder_out/spladder | mkdir -p ${sample_id}/spladder_out/spladder | ||||
| ls ${bam} | grep bam$ > alignment.txt | ls ${bam} | grep bam$ > alignment.txt | ||||
| ls ${bam} | grep bai$ alignment_bai.txt | |||||
| ls ${bam} | grep bai$ > alignment_bai.txt | |||||
| ln -s ${pickle}/*.pickle ${sample_id}/spladder_out/spladder/ | ln -s ${pickle}/*.pickle ${sample_id}/spladder_out/spladder/ | ||||
| ls ${sample_id}/spladder_out/spladder/ >> pickle.txt | ls ${sample_id}/spladder_out/spladder/ >> pickle.txt | ||||
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