2 changed files with 2 additions and 2 deletions
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defaults
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| { | { | ||||
| "starfusion_database_dir":"oss://pgx-reference-data/reference/starfusion/ctat_genome_lib_build_dir", | "starfusion_database_dir":"oss://pgx-reference-data/reference/starfusion/ctat_genome_lib_build_dir", | ||||
| "starfusion_docker":"registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/trinityctat/starfusion:1.10.0", | |||||
| "starfusion_docker":"registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fusioncatcher:v1.33", | |||||
| "starfusion_cluster":"OnDemand bcs.a2.large img-ubuntu-vpc", | "starfusion_cluster":"OnDemand bcs.a2.large img-ubuntu-vpc", | ||||
| "disk_size":"200" | "disk_size":"200" | ||||
| } | } |
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workflow.wdl
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| import "./tasks/starfusion.wdl" as starfusion | import "./tasks/starfusion.wdl" as starfusion | ||||
| workflow {{project_name}} { | |||||
| workflow {{ project_name }} { | |||||
| String sample_id | String sample_id | ||||
| File fastq1 | File fastq1 | ||||
| File fastq2 | File fastq2 |
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