YaqingLiu/ngscheckmate_fastq: Generate a VAF file from the FASTQ file. The purpose of this app is that sometimes we have to process hundreds of files. In this case, using YaqingLiu/NGSCheckMate_parallel is not an optimal choice. - defaults at 2a6dbdf9370313aa6e9b30d051c658e8305c365c - Choppy for Reproducible Omics Pipeline

Generate a VAF file from the FASTQ file. The purpose of this app is that sometimes we have to process hundreds of files. In this case, using YaqingLiu/NGSCheckMate_parallel is not an optimal choice.

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{
  "subsampling_rate": "1",
  "cluster_config": "OnDemand bcs.a2.3xlarge img-ubuntu-vpc",
  "disk_size": "100",
  "docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/ngscheckmate:v1.0.0"
}