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README.md
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| # List the parameters | # List the parameters | ||||
| $ choppy samples YaqingLiu/ngscheckmate_fastq-latest [--no-default] | $ choppy samples YaqingLiu/ngscheckmate_fastq-latest [--no-default] | ||||
| # Submit you task with the `samples.json file` and `project name` | |||||
| $ choppy batch YaqingLiu/ngscheckmate_fastq-latest samples.json -p Project [-l project:Label] | |||||
| # Submit you task with the `samples.csv file` and `project name` | |||||
| $ choppy batch YaqingLiu/ngscheckmate_fastq-latest samples.csv -p Project [-l project:Label] | |||||
| # Query the status of all tasks in the project | # Query the status of all tasks in the project | ||||
| $ choppy query -L project:Label | grep "status" | $ choppy query -L project:Label | grep "status" |
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