Generate a VAF file from the FASTQ file. The purpose of this app is that sometimes we have to process hundreds of files. In this case, using YaqingLiu/NGSCheckMate_parallel is not an optimal choice.
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3 years ago
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  1. {
  2. "{{ project_name }}.sample_id": "{{ sample_id }}",
  3. "{{ project_name }}.fastq1": "{{ fastq1 }}",
  4. "{{ project_name }}.fastq2": "{{ fastq2 }}",
  5. "{{ project_name }}.subsampling_rate": "{{ subsampling_rate }}",
  6. "{{ project_name }}.docker": "{{ docker }}",
  7. "{{ project_name }}.disk_size": "{{ disk_size }}",
  8. "{{ project_name }}.cluster_config": "{{ cluster_config }}"
  9. }