revised-bedtools-task · 61e2683fa9 - Choppy for Reproducible Omics Pipeline

revised-bedtools-task

master

stead99 5 年前

父节点

5738d30e66

当前提交

61e2683fa9

共有 1 个文件被更改，包括 1 次插入 和 1 次删除

合并视图

							
								+ 1
								
								- 1
							
tasks/bedtools.wdl查看文件
								
																command <<<
															
																command <<<
														
																    set -e -o pipefail
															
																    set -e -o pipefail
														
																	path=$(dirname ${bam})
															
																	path=$(dirname ${sep=' ' bam})
														
																	mv ${sep=' ' bai} $path
															
																	mv ${sep=' ' bai} $path
														
																	bedtools multicov -bams ${sep=' ' bam} -bed ${bed_file} > revread_count.txt 
															
																	bedtools multicov -bams ${sep=' ' bam} -bed ${bed_file} > revread_count.txt