task bcftools { | |||||
Array[File] vcf | |||||
String docker | |||||
String cluster_config | |||||
String disk_size | |||||
command <<< | |||||
set -o pipefail | |||||
set -e | |||||
mkdir -p /cromwell_root/tmp/bcftools | |||||
echo $vcf > b | |||||
>>> | |||||
runtime { | |||||
docker: docker | |||||
cluster: cluster_config | |||||
systemDisk: "cloud_ssd 40" | |||||
dataDisk: "cloud_ssd " + disk_size + " /cromwell_root/" | |||||
} | |||||
output { | |||||
File b = "b" | |||||
} | |||||
} |
import "./tasks/bcftools.wdl" as bcftools | |||||
import "./tasks/bcftools1.wdl" as bcftools | |||||
workflow {{ project_name }} { | workflow {{ project_name }} { | ||||