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defaults
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| @@ -13,7 +13,7 @@ | |||
| "bcftools_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9", | |||
| "database": "oss://pgx-reference-data/annovar/", | |||
| "regions": "oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/agilent_v6.bed", | |||
| "BCF" : ["oss://share-data-temp/TNBC/vcf/FUSCCTNBC083_pon.vcf","oss://share-data-temp/TNBC/vcf/FUSCCTNBC330_pon.vcf","oss://share-data-temp/TNBC/vcf/FUSCCTNBC467_pon.vcf"], | |||
| "BCF": ["oss://share-data-temp/TNBC/vcf/FUSCCTNBC083_pon.vcf","oss://share-data-temp/TNBC/vcf/FUSCCTNBC330_pon.vcf","oss://share-data-temp/TNBC/vcf/FUSCCTNBC467_pon.vcf"], | |||
| "PONmode": true, | |||
| "cosmic_vcf": "CosmicCodingMuts.hg19.v91.vcf", | |||
| "cosmic_dir": "oss://pgx-reference-data/reference/cosmic/", | |||
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