1 changed files with 1 additions and 2 deletions
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tasks/bamdst.wdl
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| command <<< | command <<< | ||||
| set -o pipefail | set -o pipefail | ||||
| set -e | set -e | ||||
| nt=$(nproc) | |||||
| bamdst -p ${bed} -o ./ ${bam} | bamdst -p ${bed} -o ./ ${bam} | ||||
| cp chromosomes.report ${sample}_chromosomes.report | cp chromosomes.report ${sample}_chromosomes.report | ||||
| cp coverage.report ${sample}_coverage.report | cp coverage.report ${sample}_coverage.report |
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