共有 2 个文件被更改，包括 2 次插入 和 2 次删除
+ 1
- 1
samples.json
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| { | { | ||||
| "normal_recaled_bam_bai": [ | "normal_recaled_bam_bai": [ | ||||
| ["CBCGA372775_tumor", "oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA372775_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA372775_tumor.sorted.deduped.bam.bai"], | |||||
| ["CBCGA372775_tumor","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA372775_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA372775_tumor.sorted.deduped.bam.bai"], | |||||
| ["CBCGA380400_tumor","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA380400_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA380400_tumor.sorted.deduped.bam.bai"], | ["CBCGA380400_tumor","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA380400_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA380400_tumor.sorted.deduped.bam.bai"], | ||||
| ["CBCGA382368_tumor","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA382368_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA382368_tumor.sorted.deduped.bam.bai"] | ["CBCGA382368_tumor","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA382368_tumor.sorted.deduped.bam","oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA382368_tumor.sorted.deduped.bam.bai"] | ||||
| ], | ], |
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workflow.wdl
查看文件
| String dbsnp | String dbsnp | ||||
| File regions | File regions | ||||
| Array[Array[File]] normal_recaled_bam_bai | |||||
| Array[File] normal_recaled_bam_bai | |||||
| String sentieon_docker | String sentieon_docker | ||||
| String cluster_config | String cluster_config | ||||
| String disk_size | String disk_size |
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