Fix bug: basename

tasks/BQSR.wdl

@@ -6,7 +6,7 @@ task BQSR {
   File dbmills_dir
   String db_mills
   
-  String sample=basename(normal_bam, ".*")
+  String sample=basename(realigned_bam, ".*")
   String SENTIEON_INSTALL_DIR
   String SENTIEON_LICENSE
   String fasta

tasks/Realigner.wdl

@@ -7,7 +7,7 @@ task Realigner {
 
   String SENTIEON_INSTALL_DIR
   String SENTIEON_LICENSE
-  String sample=basename(normal_bam, ".*")
+  String sample=basename(deduped_bam, ".*")
 
   File deduped_bam
   File deduped_bam_index