Generate the Panel of Normal files for TNseq and TNscope.
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README.md 573B

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  1. # README.md
  2. > Author: Yaqing Liu
  3. >
  4. > Email: [yaqing.liu@outlook.com](mailto:yaqing.liu@outlook.com)
  5. >
  6. > Last Updates: 07/04/2021
  7. #### Requirements
  8. - choppy
  9. - Ali-Cloud
  10. - Linux
  11. #### Panel of Normals
  12. The Panel of Normals approach uses a set of matched normal samples to determine the baseline level from which to call CNV events. These matched normal samples should be derived from the same library prep and sequencing workflow that was used for the case sample. This allows the algorithm to subtract out system level biases that are not sample specific.
  13. #### Usage
  14. ```