PoN/defaults

{
  "fastq_1": "",
  "fastq_2": "",
  "deduped_bam": "",
  "deduped_bam_index": "",
  "fasta": "GRCh38.d1.vd1.fa",
  "ref_dir": "oss://pgx-reference-data/GRCh38.d1.vd1/",
  "dbsnp": "dbsnp_146.hg38.vcf",
  "dbsnp_dir": "oss://pgx-reference-data/GRCh38.d1.vd1/",
  "SENTIEON_INSTALL_DIR": "/opt/sentieon-genomics",
  "SENTIEON_LICENSE": "192.168.0.55:8990",
  "dbmills_dir": "oss://pgx-reference-data/GRCh38.d1.vd1/",
  "db_mills": "Mills_and_1000G_gold_standard.indels.hg38.vcf",
  "sentieon_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/sentieon-genomics:v202010.02",
  "regions": "oss://pgx-reference-data/bed/cbcga/S07604514_Padded.bed",
  "disk_size": "200",
  "cluster_config": "OnDemand bcs.a2.3xlarge img-ubuntu-vpc"
}