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workflow.wdl
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| import "./tasks/Haplotyper.wdl" as Haplotyper | |||
| import "./tasks/TNseq.wdl" as TNseq | |||
| import "./tasks/bcftools.wdl" as bcftools | |||
| import "./tasks/ANNOVAR.wdl" as ANNOVAR | |||
| import "./tasks/Manta.wdl" as Manta | |||
| import "./tasks/AnnotSV.wdl" as AnnotSV | |||
| import "./tasks/CNVkit.wdl" as CNVkit | |||
| import "./tasks/MSIsensor.wdl" as MSIsensor | |||
| import "./tasks/HRD.wdl" as HRD | |||
| import "./tasks/TMB.wdl" as TMB | |||
| workflow {{ project_name }} { | |||
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