1 ändrade filer med 1 tillägg och 1 borttagningar
+ 1
- 1
tasks/annovar.wdl
Visa fil
| @@ -21,7 +21,7 @@ task annovar { | |||
| ${annovar_database} -buildver ${hg} \ | |||
| -out ${basename} -remove \ | |||
| -protocol refGene,ensGene,knownGene,rmsk,esp6500siv2_all,ALL.sites.2015_08,AFR.sites.2015_08,AMR.sites.2015_08,EAS.sites.2015_08,EUR.sites.2015_08,SAS.sites.2015_08,avsnp147,dbnsfp33a,clinvar_20210501,gnomad_genome,dbscsnv11,dbnsfp31a_interpro \ | |||
| -operation g,g,g,r,f,f,f,f,f,f,f,f \ | |||
| -operation g,g,g,r,f,f,f,f,f,f,f,f,f,f,f,f,f \ | |||
| -nastring . -vcfinput -thread $nt | |||
| fi | |||
Laddar…