ANNOVAR/workflow.wdl

import "./tasks/annovar.wdl" as annovar

workflow {{ project_name }} {
	
	String sample_id
	File vcf
	File database
	String annovar_docker
	String disk_size
	String cluster_config

	call annovar.annovar as indel_loh_annovar {
		input: 
		sample_id=sample_id,
		vcf=vcf,
		database=database,
		docker=annovar_docker,
		cluster_config=cluster_config,
		disk_size=disk_size
	}
}