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"Chaining Pipeline: filter-files -> copy-files -> multiqc." |
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"Chaining Pipeline: filter-files -> copy-files -> multiqc." |
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[{:keys [datadir parameters dest-dir task-id]}] |
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[{:keys [datadir parameters dest-dir task-id]}] |
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(log/info "Generate quartet dnaseq report: " datadir parameters dest-dir) |
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(log/info "Generate quartet dnaseq report: " datadir parameters dest-dir) |
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(let [parameters-file (fs-lib/join-paths dest-dir |
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"results" |
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"general-info.json") |
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(let [parameters-file (fs-lib/join-paths dest-dir "general_information.json") |
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log-path (fs-lib/join-paths dest-dir "log")] |
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log-path (fs-lib/join-paths dest-dir "log")] |
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(try |
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(try |
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(filter-mkdir-copy datadir [".*call-extract_tables/.*.txt"] dest-dir "call-extract_tables") |
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(filter-mkdir-copy datadir [".*call-extract_tables/.*.txt"] dest-dir "call-extract_tables") |