{ | { | ||||
"title": "Correlation Plot", | |||||
"maintainer": "Jingcheng Yang", | |||||
"description": "Correlation plots can be used to quickly find insights. It is used to investigate the dependence between multiple variables at the same time and to highlight the most correlated variables in a data table.", | |||||
"logo": "https://store-images.s-microsoft.com/image/apps.30079.0034b9fb-e1fa-4c69-b5b7-de0750ba3098.c645c7e3-2d23-4418-9288-0bd1322b1070.9112ecd7-1c16-4a37-ab49-a5b2c2b61542.png", | |||||
"version": "v0.1.0", | |||||
"readme": "http: //nordata-cdn.oss-cn-shanghai.aliyuncs.com/test.md", | |||||
"tags": [ | |||||
"R", | |||||
"Chart" | |||||
], | |||||
"fields": [ | "fields": [ | ||||
{ | { | ||||
"key": "corr_vars", | "key": "corr_vars", | ||||
"valueType": "select", | "valueType": "select", | ||||
"title": "Correlation Variables", | "title": "Correlation Variables", | ||||
"tooltip": "Which variables do you want to analyze?", | "tooltip": "Which variables do you want to analyze?", | ||||
"valueEnum": {{ columns }}, | |||||
"valueEnum": "{{{tojson columns }}}", | |||||
"fieldProps": { | "fieldProps": { | ||||
"mode": "multiple", | |||||
"mode": "multiple" | |||||
}, | }, | ||||
"formItemProps": { | "formItemProps": { | ||||
"rules": [ | "rules": [ | ||||
"dataIndex": "sig_level", | "dataIndex": "sig_level", | ||||
"valueType": "switch", | "valueType": "switch", | ||||
"title": "Cluster Ordered", | "title": "Cluster Ordered", | ||||
"tooltip": "Significant level, greater than 0 and less than 1." | |||||
"tooltip": "Significant level, greater than 0 and less than 1.", | |||||
"fieldProps": { | "fieldProps": { | ||||
"step": 0.01 | "step": 0.01 | ||||
}, | }, |
source: PGx | source: PGx | ||||
short_name: corrplot | short_name: corrplot | ||||
icons: | icons: | ||||
- src: "" | |||||
- src: "http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/biominer/corrplot-logo-144x144.png" | |||||
type: image/png | type: image/png | ||||
sizes: 192x192 | sizes: 192x192 | ||||
author: Jingcheng Yang | author: Jingcheng Yang | ||||
maintainers: | |||||
- Jingcheng Yang | |||||
tags: | |||||
- R | |||||
- Chart | |||||
readme: http://nordata-cdn.oss-cn-shanghai.aliyuncs.com/test.md | |||||
plugin: | plugin: | ||||
name: corrplot | name: corrplot | ||||
display-name: Correlation Plot | display-name: Correlation Plot |
(s/def ::sig_level | (s/def ::sig_level | ||||
(st/spec | (st/spec | ||||
{:spec #(and (>= % 0) (<= % 1)) | |||||
:type :float | |||||
{:spec #(and float? (>= % 0) (<= % 1)) | |||||
:type :number | |||||
:format :float | |||||
:description "Significant level, greater than 0 and less than 1." | :description "Significant level, greater than 0 and less than 1." | ||||
:swagger/default 0.05 | :swagger/default 0.05 | ||||
:reason "The sig_level must be a float."})) | :reason "The sig_level must be a float."})) | ||||
;; Handlers | ;; Handlers | ||||
(defn get-handler | (defn get-handler | ||||
[{{:keys [config-dir]} :plugin-env}] | [{{:keys [config-dir]} :plugin-env}] | ||||
(let [plugin-schema (fs-lib/join-paths config-dir "templates/plugin-schema.json.mustache")] | |||||
{:data (slurp plugin-schema)})) | |||||
(let [plugin-schema (fs-lib/join-paths config-dir "templates/plugin-schema.handlebars.json")] | |||||
{:schema (json/read-str (slurp plugin-schema))})) | |||||
(defn post-handler | (defn post-handler | ||||
[{:keys [datafile corr_vars sig_level hc_order hc_method corr_type method plugin-env] | [{:keys [datafile corr_vars sig_level hc_order hc_method corr_type method plugin-env] | ||||
:env-dir (:env-dir plugin-env) | :env-dir (:env-dir plugin-env) | ||||
:dest-dir workdir | :dest-dir workdir | ||||
:task-id task-id}) | :task-id task-id}) | ||||
response)) | |||||
(merge response {:task-id task-id}))) | |||||
(def metadata | (def metadata | ||||
(make-routes "corrplot" :ChartPlugin | (make-routes "corrplot" :ChartPlugin | ||||
{:method-type :get | {:method-type :get | ||||
:summary "A json schema for corrplot plugin." | |||||
:endpoint "corrplot-ui-schema" | |||||
:summary "A ui schema for corrplot plugin." | |||||
:query-schema nil | :query-schema nil | ||||
:path-schema nil | :path-schema nil | ||||
:response-schema map? | :response-schema map? |