task mergefq { File fq1 File fq2 File fq3 String fq_m String disk_size String docker String cluster_config command <<< set -euo pipefail if [ ${fq3} != "" ]; then cat ${fq1} ${fq2} > ${fq_m} else cat ${fq1} ${fq2} ${fq3} > ${fq_m} fi >>> runtime { docker: docker systemDisk: "cloud_ssd 40" cluster: cluster_config dataDisk:"cloud_ssd " + disk_size + " /cromwell_root/" } output { File merge_fq = "${fq_m}" } }