共有 2 個文件被更改，包括 3 次插入 和 1 次删除
+ 1
- 0
inputs
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| "{{ project_name }}.fq3": "{{ fq3 }}", | "{{ project_name }}.fq3": "{{ fq3 }}", | ||||
| "{{ project_name }}.fq_m": "{{ fq_m }}", | "{{ project_name }}.fq_m": "{{ fq_m }}", | ||||
| "{{ project_name }}.disk_size": "{{ disk_size }}", | "{{ project_name }}.disk_size": "{{ disk_size }}", | ||||
| "{{ project_name }}.docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fastp:0.19.6", | |||||
| "{{ project_name }}.cluster_config": "OnDemand bcs.a2.large img-ubuntu-vpc" | "{{ project_name }}.cluster_config": "OnDemand bcs.a2.large img-ubuntu-vpc" | ||||
| } | } |
+ 2
- 1
tasks/mergefq.wdl
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| if [ ! ${fq3} ]; then | if [ ! ${fq3} ]; then | ||||
| cat ${fq1} ${fq2} > ${fq_m} | cat ${fq1} ${fq2} > ${fq_m} | ||||
| else | else | ||||
| cat ${fq1} ${fq2} ${fq3} > ${fq_m} | |||||
| cat ${fq1} ${fq2} ${fq3} > ${fq_m} | |||||
| fi | fi | ||||
| >>> | >>> | ||||
| runtime { | runtime { | ||||
| docker: docker | |||||
| systemDisk: "cloud_ssd 40" | systemDisk: "cloud_ssd 40" | ||||
| cluster: cluster_config | cluster: cluster_config | ||||
| dataDisk:"cloud_ssd " + disk_size + " /cromwell_root/" | dataDisk:"cloud_ssd " + disk_size + " /cromwell_root/" |
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