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quartet_vcf_qc
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quartet_vcf_qc/samples

samples 27KB
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first commit
4年前
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  1. gvcf_list,project,sample_id,gvcf_idx_list

  2. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-0/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-1/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-10/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-11/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-2/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-3/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-4/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-5/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-6/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-7/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-8/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-9/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_1_20180518_hc.g.vcf,Quartet_DNA_BGI_SEQ2000_BGI_20180530,1,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-0/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-1/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-10/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-11/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-2/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-3/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-4/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-5/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-6/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-7/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-8/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-9/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_1_20180518_hc.g.vcf.idx

  3. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-72/Quartet_DNA_BGI_T7_WGE_LCL5_1_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-73/Quartet_DNA_BGI_T7_WGE_LCL5_2_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-74/Quartet_DNA_BGI_T7_WGE_LCL5_3_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-75/Quartet_DNA_BGI_T7_WGE_LCL6_1_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-76/Quartet_DNA_BGI_T7_WGE_LCL6_2_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-77/Quartet_DNA_BGI_T7_WGE_LCL6_3_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-78/Quartet_DNA_BGI_T7_WGE_LCL7_1_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-79/Quartet_DNA_BGI_T7_WGE_LCL7_2_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-80/Quartet_DNA_BGI_T7_WGE_LCL7_3_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-81/Quartet_DNA_BGI_T7_WGE_LCL8_1_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-82/Quartet_DNA_BGI_T7_WGE_LCL8_2_20191105_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-83/Quartet_DNA_BGI_T7_WGE_LCL8_3_20191105_hc.g.vcf,Quartet_DNA_BGI_T7_WGE_20191105,2,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-72/Quartet_DNA_BGI_T7_WGE_LCL5_1_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-73/Quartet_DNA_BGI_T7_WGE_LCL5_2_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-74/Quartet_DNA_BGI_T7_WGE_LCL5_3_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-75/Quartet_DNA_BGI_T7_WGE_LCL6_1_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-76/Quartet_DNA_BGI_T7_WGE_LCL6_2_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-77/Quartet_DNA_BGI_T7_WGE_LCL6_3_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-78/Quartet_DNA_BGI_T7_WGE_LCL7_1_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-79/Quartet_DNA_BGI_T7_WGE_LCL7_2_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-80/Quartet_DNA_BGI_T7_WGE_LCL7_3_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-81/Quartet_DNA_BGI_T7_WGE_LCL8_1_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-82/Quartet_DNA_BGI_T7_WGE_LCL8_2_20191105_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-83/Quartet_DNA_BGI_T7_WGE_LCL8_3_20191105_hc.g.vcf.idx

  4. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-48/Quartet_DNA_ILM_Nova_ARD_LCL5_1_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-49/Quartet_DNA_ILM_Nova_ARD_LCL5_2_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-50/Quartet_DNA_ILM_Nova_ARD_LCL5_3_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-54/Quartet_DNA_ILM_Nova_ARD_LCL6_1_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-55/Quartet_DNA_ILM_Nova_ARD_LCL6_2_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-56/Quartet_DNA_ILM_Nova_ARD_LCL6_3_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-60/Quartet_DNA_ILM_Nova_ARD_LCL7_1_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-61/Quartet_DNA_ILM_Nova_ARD_LCL7_2_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-62/Quartet_DNA_ILM_Nova_ARD_LCL7_3_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-66/Quartet_DNA_ILM_Nova_ARD_LCL8_1_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-67/Quartet_DNA_ILM_Nova_ARD_LCL8_2_20181108_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-68/Quartet_DNA_ILM_Nova_ARD_LCL8_3_20181108_hc.g.vcf,Quartet_DNA_ILM_Nova_ARD_20181108,3,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-48/Quartet_DNA_ILM_Nova_ARD_LCL5_1_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-49/Quartet_DNA_ILM_Nova_ARD_LCL5_2_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-50/Quartet_DNA_ILM_Nova_ARD_LCL5_3_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-54/Quartet_DNA_ILM_Nova_ARD_LCL6_1_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-55/Quartet_DNA_ILM_Nova_ARD_LCL6_2_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-56/Quartet_DNA_ILM_Nova_ARD_LCL6_3_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-60/Quartet_DNA_ILM_Nova_ARD_LCL7_1_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-61/Quartet_DNA_ILM_Nova_ARD_LCL7_2_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-62/Quartet_DNA_ILM_Nova_ARD_LCL7_3_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-66/Quartet_DNA_ILM_Nova_ARD_LCL8_1_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-67/Quartet_DNA_ILM_Nova_ARD_LCL8_2_20181108_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-68/Quartet_DNA_ILM_Nova_ARD_LCL8_3_20181108_hc.g.vcf.idx

  5. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-51/Quartet_DNA_ILM_Nova_ARD_LCL5_4_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-52/Quartet_DNA_ILM_Nova_ARD_LCL5_5_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-53/Quartet_DNA_ILM_Nova_ARD_LCL5_6_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-57/Quartet_DNA_ILM_Nova_ARD_LCL6_4_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-58/Quartet_DNA_ILM_Nova_ARD_LCL6_5_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-59/Quartet_DNA_ILM_Nova_ARD_LCL6_6_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-63/Quartet_DNA_ILM_Nova_ARD_LCL7_4_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-64/Quartet_DNA_ILM_Nova_ARD_LCL7_5_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-65/Quartet_DNA_ILM_Nova_ARD_LCL7_6_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-69/Quartet_DNA_ILM_Nova_ARD_LCL8_4_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-70/Quartet_DNA_ILM_Nova_ARD_LCL8_5_20190111_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-71/Quartet_DNA_ILM_Nova_ARD_LCL8_6_20190111_hc.g.vcf,Quartet_DNA_ILM_Nova_ARD_20190111,4,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-51/Quartet_DNA_ILM_Nova_ARD_LCL5_4_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-52/Quartet_DNA_ILM_Nova_ARD_LCL5_5_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-53/Quartet_DNA_ILM_Nova_ARD_LCL5_6_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-57/Quartet_DNA_ILM_Nova_ARD_LCL6_4_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-58/Quartet_DNA_ILM_Nova_ARD_LCL6_5_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-59/Quartet_DNA_ILM_Nova_ARD_LCL6_6_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-63/Quartet_DNA_ILM_Nova_ARD_LCL7_4_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-64/Quartet_DNA_ILM_Nova_ARD_LCL7_5_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-65/Quartet_DNA_ILM_Nova_ARD_LCL7_6_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-69/Quartet_DNA_ILM_Nova_ARD_LCL8_4_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-70/Quartet_DNA_ILM_Nova_ARD_LCL8_5_20190111_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-71/Quartet_DNA_ILM_Nova_ARD_LCL8_6_20190111_hc.g.vcf.idx

  6. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-96/Quartet_DNA_ILM_Nova_BRG_LCL5_1_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-97/Quartet_DNA_ILM_Nova_BRG_LCL5_2_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-98/Quartet_DNA_ILM_Nova_BRG_LCL5_3_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-99/Quartet_DNA_ILM_Nova_BRG_LCL6_1_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-100/Quartet_DNA_ILM_Nova_BRG_LCL6_2_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-101/Quartet_DNA_ILM_Nova_BRG_LCL6_3_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-102/Quartet_DNA_ILM_Nova_BRG_LCL7_1_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-103/Quartet_DNA_ILM_Nova_BRG_LCL7_2_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-104/Quartet_DNA_ILM_Nova_BRG_LCL7_3_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-105/Quartet_DNA_ILM_Nova_BRG_LCL8_1_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-106/Quartet_DNA_ILM_Nova_BRG_LCL8_2_20180930_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-107/Quartet_DNA_ILM_Nova_BRG_LCL8_3_20180930_hc.g.vcf,Quartet_DNA_ILM_Nova_BRG_20180930,5,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-96/Quartet_DNA_ILM_Nova_BRG_LCL5_1_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-97/Quartet_DNA_ILM_Nova_BRG_LCL5_2_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-98/Quartet_DNA_ILM_Nova_BRG_LCL5_3_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-99/Quartet_DNA_ILM_Nova_BRG_LCL6_1_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-100/Quartet_DNA_ILM_Nova_BRG_LCL6_2_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-101/Quartet_DNA_ILM_Nova_BRG_LCL6_3_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-102/Quartet_DNA_ILM_Nova_BRG_LCL7_1_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-103/Quartet_DNA_ILM_Nova_BRG_LCL7_2_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-104/Quartet_DNA_ILM_Nova_BRG_LCL7_3_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-105/Quartet_DNA_ILM_Nova_BRG_LCL8_1_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-106/Quartet_DNA_ILM_Nova_BRG_LCL8_2_20180930_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-107/Quartet_DNA_ILM_Nova_BRG_LCL8_3_20180930_hc.g.vcf.idx

  7. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-84/Quartet_DNA_ILM_Nova_WUX_LCL5_1_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-91/Quartet_DNA_ILM_Nova_WUX_LCL5_2_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-95/Quartet_DNA_ILM_Nova_WUX_LCL5_3_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-85/Quartet_DNA_ILM_Nova_WUX_LCL6_1_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-89/Quartet_DNA_ILM_Nova_WUX_LCL6_2_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-94/Quartet_DNA_ILM_Nova_WUX_LCL6_3_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-86/Quartet_DNA_ILM_Nova_WUX_LCL7_1_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-90/Quartet_DNA_ILM_Nova_WUX_LCL7_2_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-93/Quartet_DNA_ILM_Nova_WUX_LCL7_3_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-87/Quartet_DNA_ILM_Nova_WUX_LCL8_1_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-88/Quartet_DNA_ILM_Nova_WUX_LCL8_2_20190917_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-92/Quartet_DNA_ILM_Nova_WUX_LCL8_3_20190917_hc.g.vcf,Quartet_DNA_ILM_Nova_WUX_20190917,6,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-84/Quartet_DNA_ILM_Nova_WUX_LCL5_1_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-91/Quartet_DNA_ILM_Nova_WUX_LCL5_2_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-95/Quartet_DNA_ILM_Nova_WUX_LCL5_3_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-85/Quartet_DNA_ILM_Nova_WUX_LCL6_1_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-89/Quartet_DNA_ILM_Nova_WUX_LCL6_2_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-94/Quartet_DNA_ILM_Nova_WUX_LCL6_3_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-86/Quartet_DNA_ILM_Nova_WUX_LCL7_1_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-90/Quartet_DNA_ILM_Nova_WUX_LCL7_2_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-93/Quartet_DNA_ILM_Nova_WUX_LCL7_3_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-87/Quartet_DNA_ILM_Nova_WUX_LCL8_1_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-88/Quartet_DNA_ILM_Nova_WUX_LCL8_2_20190917_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-92/Quartet_DNA_ILM_Nova_WUX_LCL8_3_20190917_hc.g.vcf.idx

  8. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-12/Quartet_DNA_ILM_XTen_ARD_LCL5_1_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-13/Quartet_DNA_ILM_XTen_ARD_LCL5_2_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-14/Quartet_DNA_ILM_XTen_ARD_LCL5_3_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-15/Quartet_DNA_ILM_XTen_ARD_LCL6_1_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-16/Quartet_DNA_ILM_XTen_ARD_LCL6_2_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-17/Quartet_DNA_ILM_XTen_ARD_LCL6_3_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-18/Quartet_DNA_ILM_XTen_ARD_LCL7_1_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-19/Quartet_DNA_ILM_XTen_ARD_LCL7_2_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-20/Quartet_DNA_ILM_XTen_ARD_LCL7_3_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-21/Quartet_DNA_ILM_XTen_ARD_LCL8_1_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-22/Quartet_DNA_ILM_XTen_ARD_LCL8_2_20170403_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-23/Quartet_DNA_ILM_XTen_ARD_LCL8_3_20170403_hc.g.vcf,Quartet_DNA_ILM_XTen_ARD_20170403,7,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-12/Quartet_DNA_ILM_XTen_ARD_LCL5_1_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-13/Quartet_DNA_ILM_XTen_ARD_LCL5_2_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-14/Quartet_DNA_ILM_XTen_ARD_LCL5_3_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-15/Quartet_DNA_ILM_XTen_ARD_LCL6_1_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-16/Quartet_DNA_ILM_XTen_ARD_LCL6_2_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-17/Quartet_DNA_ILM_XTen_ARD_LCL6_3_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-18/Quartet_DNA_ILM_XTen_ARD_LCL7_1_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-19/Quartet_DNA_ILM_XTen_ARD_LCL7_2_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-20/Quartet_DNA_ILM_XTen_ARD_LCL7_3_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-21/Quartet_DNA_ILM_XTen_ARD_LCL8_1_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-22/Quartet_DNA_ILM_XTen_ARD_LCL8_2_20170403_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-23/Quartet_DNA_ILM_XTen_ARD_LCL8_3_20170403_hc.g.vcf.idx

  9. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-24/Quartet_DNA_ILM_XTen_NVG_LCL5_1_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-25/Quartet_DNA_ILM_XTen_NVG_LCL5_2_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-26/Quartet_DNA_ILM_XTen_NVG_LCL5_3_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-27/Quartet_DNA_ILM_XTen_NVG_LCL6_1_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-28/Quartet_DNA_ILM_XTen_NVG_LCL6_2_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-29/Quartet_DNA_ILM_XTen_NVG_LCL6_3_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-30/Quartet_DNA_ILM_XTen_NVG_LCL7_1_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-31/Quartet_DNA_ILM_XTen_NVG_LCL7_2_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-32/Quartet_DNA_ILM_XTen_NVG_LCL7_3_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-33/Quartet_DNA_ILM_XTen_NVG_LCL8_1_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-34/Quartet_DNA_ILM_XTen_NVG_LCL8_2_20170329_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-35/Quartet_DNA_ILM_XTen_NVG_LCL8_3_20170329_hc.g.vcf,Quartet_DNA_ILM_XTen_NVG_20170329,8,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-24/Quartet_DNA_ILM_XTen_NVG_LCL5_1_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-25/Quartet_DNA_ILM_XTen_NVG_LCL5_2_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-26/Quartet_DNA_ILM_XTen_NVG_LCL5_3_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-27/Quartet_DNA_ILM_XTen_NVG_LCL6_1_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-28/Quartet_DNA_ILM_XTen_NVG_LCL6_2_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-29/Quartet_DNA_ILM_XTen_NVG_LCL6_3_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-30/Quartet_DNA_ILM_XTen_NVG_LCL7_1_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-31/Quartet_DNA_ILM_XTen_NVG_LCL7_2_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-32/Quartet_DNA_ILM_XTen_NVG_LCL7_3_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-33/Quartet_DNA_ILM_XTen_NVG_LCL8_1_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-34/Quartet_DNA_ILM_XTen_NVG_LCL8_2_20170329_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-35/Quartet_DNA_ILM_XTen_NVG_LCL8_3_20170329_hc.g.vcf.idx

  10. oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-36/Quartet_DNA_ILM_XTen_WUX_LCL5_1_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-37/Quartet_DNA_ILM_XTen_WUX_LCL5_2_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-38/Quartet_DNA_ILM_XTen_WUX_LCL5_3_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-39/Quartet_DNA_ILM_XTen_WUX_LCL6_1_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-40/Quartet_DNA_ILM_XTen_WUX_LCL6_2_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-41/Quartet_DNA_ILM_XTen_WUX_LCL6_3_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-42/Quartet_DNA_ILM_XTen_WUX_LCL7_1_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-43/Quartet_DNA_ILM_XTen_WUX_LCL7_2_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-44/Quartet_DNA_ILM_XTen_WUX_LCL7_3_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-45/Quartet_DNA_ILM_XTen_WUX_LCL8_1_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-46/Quartet_DNA_ILM_XTen_WUX_LCL8_2_20170216_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-47/Quartet_DNA_ILM_XTen_WUX_LCL8_3_20170216_hc.g.vcf,Quartet_DNA_ILM_XTen_WUX_20170216,9,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-36/Quartet_DNA_ILM_XTen_WUX_LCL5_1_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-37/Quartet_DNA_ILM_XTen_WUX_LCL5_2_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-38/Quartet_DNA_ILM_XTen_WUX_LCL5_3_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-39/Quartet_DNA_ILM_XTen_WUX_LCL6_1_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-40/Quartet_DNA_ILM_XTen_WUX_LCL6_2_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-41/Quartet_DNA_ILM_XTen_WUX_LCL6_3_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-42/Quartet_DNA_ILM_XTen_WUX_LCL7_1_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-43/Quartet_DNA_ILM_XTen_WUX_LCL7_2_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-44/Quartet_DNA_ILM_XTen_WUX_LCL7_3_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-45/Quartet_DNA_ILM_XTen_WUX_LCL8_1_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-46/Quartet_DNA_ILM_XTen_WUX_LCL8_2_20170216_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-47/Quartet_DNA_ILM_XTen_WUX_LCL8_3_20170216_hc.g.vcf.idx

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