LUYAO REN
3 年之前
共有 2 個檔案被更改，包括 2 行新增 和 4 行删除
+ 1
- 1
tasks/deduped_Metrics.wdl
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| task deduped_Metrics { | task deduped_Metrics { | ||||
| File ref_dir | File ref_dir | ||||
| File bed | |||||
| File? bed | |||||
| String SENTIEON_INSTALL_DIR | String SENTIEON_INSTALL_DIR | ||||
| String sample | String sample | ||||
| String fasta | String fasta |
+ 1
- 3
tasks/qualimap.wdl
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| task qualimap { | task qualimap { | ||||
| File bam | File bam | ||||
| File bai | File bai | ||||
| File bed | |||||
| File? bed | |||||
| String bamname = basename(bam,".bam") | String bamname = basename(bam,".bam") | ||||
| String docker | String docker | ||||
| String cluster_config | String cluster_config | ||||
| String disk_size | String disk_size | ||||
| File? bed | |||||
| command <<< | command <<< | ||||
| set -o pipefail | set -o pipefail | ||||
| set -e | set -e |
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