LUYAO REN
4 yıl önce
1 değiştirilmiş dosya ile 2 ekleme ve 0 silme
+ 2
- 0
tasks/multiqc.wdl
Dosyayı Görüntüle
| cp ${sep=" " read1_zip} ${sep=" " read2_zip} /cromwell_root/tmp/fastqc | cp ${sep=" " read1_zip} ${sep=" " read2_zip} /cromwell_root/tmp/fastqc | ||||
| cp ${sep=" " txt1} ${sep=" " txt2} /cromwell_root/tmp/fastqscreen | cp ${sep=" " txt1} ${sep=" " txt2} /cromwell_root/tmp/fastqscreen | ||||
| multiqc /cromwell_root/tmp/ | |||||
| cat multiqc_data/multiqc_general_stats.txt > multiqc_general_stats.txt | cat multiqc_data/multiqc_general_stats.txt > multiqc_general_stats.txt | ||||
| cat multiqc_data/multiqc_fastq_screen.txt > multiqc_fastq_screen.txt | cat multiqc_data/multiqc_fastq_screen.txt > multiqc_fastq_screen.txt | ||||
| cat multiqc_data/multiqc_happy_data.json > multiqc_happy_data.json | cat multiqc_data/multiqc_happy_data.json > multiqc_happy_data.json |
Yükleniyor…