recovery multiqc

workflow.wdl

@@ -222,18 +222,18 @@ workflow {{ project_name }} {
 
 	}
 
-#	call multiqc.multiqc as multiqc {
-#		input:
-#		read1_zip=fastqc.read1_zip,
-#		read2_zip=fastqc.read2_zip,
-#		txt1=fastqscreen.txt1,
-#		txt2=fastqscreen.txt2,
-#		summary=benchmark.summary,
-#		zip=qualimap.zip,
-#		docker=MULTIQCdocker,
-#		cluster_config=SMALLcluster_config,
-#		disk_size=disk_size
-#	}
+	call multiqc.multiqc as multiqc {
+		input:
+		read1_zip=fastqc.read1_zip,
+		read2_zip=fastqc.read2_zip,
+		txt1=fastqscreen.txt1,
+		txt2=fastqscreen.txt2,
+		summary=benchmark.summary,
+		zip=qualimap.zip,
+		docker=MULTIQCdocker,
+		cluster_config=SMALLcluster_config,
+		disk_size=disk_size
+	}
 
 	call merge_sentieon_metrics.merge_sentieon_metrics as merge_sentieon_metrics {
 		input: