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5 yıl önce
5 yıl önce
5 yıl önce
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  1. {
  2. "{{ project_name }}.giab_snv_idx": "oss://pgx-result/renluyao/model_validation/NIST.snv.vcf.gz.tbi",
  3. "{{ project_name }}.vcfeval.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-hap:latest",
  4. "{{ project_name }}.fasta": "GRCh38.d1.vd1.fa",
  5. "{{ project_name }}.snv_train": "{{ snv_train }}",
  6. "{{ project_name }}.giab_snv": "oss://pgx-result/renluyao/model_validation/NIST.snv.vcf.gz",
  7. "{{ project_name }}.disk_size": "100",
  8. "{{ project_name }}.nu": "{{ nu }}",
  9. "{{ project_name }}.ExtractVCFinfo.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/model_validation:v1.0",
  10. "{{ project_name }}.giab_indel": "oss://pgx-result/renluyao/model_validation/NIST.indel.vcf.gz",
  11. "{{ project_name }}.SepSnvIndel.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",
  12. "{{ project_name }}.indel_train": "{{ indel_train }}",
  13. "{{ project_name }}.giab_bed": "oss://pgx-result/renluyao/model_validation/HG001_GRCh38_GIAB_highconf_CG-IllFB-IllGATKHC-Ion-10X-SOLID_CHROM1-X_v.3.3.2_highconf_nosomaticdel_noCENorHET7.bed",
  14. "{{ project_name }}.oneClass.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/model_validation:v1.0",
  15. "{{ project_name }}.indelNorm.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9",
  16. "{{ project_name }}.SepTrueFalse.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",
  17. "{{ project_name }}.kernel": "{{ kernel }}",
  18. "{{ project_name }}.sdf": "oss://chinese-quartet/quartet-storage-data/reference_data/GRCh38.d1.vd1.sdf/",
  19. "{{ project_name }}.cluster_config": "OnDemand ecs.se1ne.xlarge img-ubuntu-vpc",
  20. "{{ project_name }}.nist_sample_name": "{{ nist_sample_name }}",
  21. "{{ project_name }}.nist_vcf": "{{ nist_vcf }}",
  22. "{{ project_name }}.giab_indel_idx": "oss://pgx-result/renluyao/model_validation/NIST.indel.vcf.gz.tbi",
  23. "{{ project_name }}.ref_dir": "oss://chinese-quartet/quartet-storage-data/reference_data/"
  24. }