LUYAO REN
5 年之前
共有 1 個檔案被更改，包括 2 行新增 和 2 行删除
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- 2
tasks/merge_mendelian_vote.wdl
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| python /opt/merge_mendelian_vote.py ${mendelian_file} ${vote_file} ${mut_file} ${output_prefix}.mendelian.vote.txt | python /opt/merge_mendelian_vote.py ${mendelian_file} ${vote_file} ${mut_file} ${output_prefix}.mendelian.vote.txt | ||||
| cat ${output_prefix}.mendelian.vote.txt | awk '{ if ((length($6) < 51) || (length($7) < 51)) { print } }' > ${output_prefix}.snv | |||||
| cat ${output_prefix}.mendelian.vote.txt | awk '{ if ((length($6) == 1) || (length($7) == 1)) { print } }' > ${output_prefix}.snv | |||||
| cat ${output_prefix}.mendelian.vote.txt | awk '{ if ((length($6) > 50) || (length($7) > 50)) { print } }' > ${output_prefix}.indel | |||||
| cat ${output_prefix}.mendelian.vote.txt | awk '{ if ((length($6) > 1) || (length($7) > 1)) { print } }' > ${output_prefix}.indel | |||||
| >>> | >>> | ||||
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