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high_confidence_calls_intergration
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high_confidence_calls_inter.../inputs

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  1. {

  2.   "{{ project_name }}.LCL7merge.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  3.   "{{ project_name }}.fasta": "GRCh38.d1.vd1.fa",

  4.   "{{ project_name }}.LCL6familyzipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  5.   "{{ project_name }}.LCL7votes.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call:v1.1",

  6.   "{{ project_name }}.LCL6votes.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call:v1.1",

  7.   "{{ project_name }}.LCL5VCFrename.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  8.   "{{ project_name }}.LCL6mendelian.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/vbt:v1.1",

  9.   "{{ project_name }}.mergeSister.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  10.   "{{ project_name }}.LCL5mendelian.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/vbt:v1.1",

  11.   "{{ project_name }}.disk_size": "150",

  12.   "{{ project_name }}.inputSamplesFile": "{{ inputSamplesFile }}",

  13.   "{{ project_name }}.LCL6merge.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  14.   "{{ project_name }}.LCL6variantsNorm.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9",

  15.   "{{ project_name }}.LCL6zipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  16.   "{{ project_name }}.LCL5votes.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call:v1.1",

  17.   "{{ project_name }}.LCL7familyzipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  18.   "{{ project_name }}.LCL5familyzipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  19.   "{{ project_name }}.LCL6VCFrename.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  20.   "{{ project_name }}.LCL5merge.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  21.   "{{ project_name }}.LCL8votes.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call:v1.1",

  22.   "{{ project_name }}.reformVCF.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call:v1.1",

  23.   "{{ project_name }}.LCL5zipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  24.   "{{ project_name }}.cluster_config": "OnDemand bcs.a2.xlarge img-ubuntu-vpc",

  25.   "{{ project_name }}.LCL8familyzipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  26.   "{{ project_name }}.LCL7variantsNorm.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9",

  27.   "{{ project_name }}.LCL8merge.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  28.   "{{ project_name }}.LCL5variantsNorm.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9",

  29.   "{{ project_name }}.LCL8variantsNorm.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bcftools:v1.9",

  30.   "{{ project_name }}.ref_dir": "oss://chinese-quartet/quartet-storage-data/reference_data/"

  31. }

  32.