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vcf to txt

master
LUYAO REN 5 years ago
parent
commit
9dd60737da
1 changed files with 2 additions and 2 deletions
  1. +2
    -2
      tasks/replicate_consensus.wdl

+ 2
- 2
tasks/replicate_consensus.wdl View File

@@ -6,8 +6,8 @@ task replicate_consensus {
String disk_size
command <<<
python /opt/replicates_consensus.py -vcf ${chromo_file} -prefix ${chromo}
cat ${chromo_file} | grep -v '##' > ${chromo}.txt
python /opt/replicates_consensus.py -vcf ${chromo}.txt -prefix ${chromo}


>>>

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