renluyao
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benchmark_calls_gvcf
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benchmark_calls_gvcf/inputs

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  1. {

  2.   "{{ project_name }}.fasta": "GRCh38.d1.vd1.fa",

  3.   "{{ project_name }}.LCL5VCFrename.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  4.   "{{ project_name }}.LCL6mendelian.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/vbt:v1.1",

  5.   "{{ project_name }}.mergeSister.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  6.   "{{ project_name }}.LCL5mendelian.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/vbt:v1.1",

  7.   "{{ project_name }}.disk_size": "150",

  8.   "{{ project_name }}.inputSamplesFile": "{{ inputSamplesFile }}",

  9.   "{{ project_name }}.LCL6zipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  10.   "{{ project_name }}.LCL6VCFrename.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  11.   "{{ project_name }}.reformVCF.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/high_confidence_call_manuscript:v1.1",

  12.   "{{ project_name }}.LCL5zipIndex.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-tools:latest",

  13.   "{{ project_name }}.cluster_config": "OnDemand bcs.b4.xlarge img-ubuntu-vpc",

  14.   "{{ project_name }}.ref_dir": "oss://chinese-quartet/quartet-storage-data/reference_data/"

  15. }

  16. 

  17.