VQSR/inputs

{
  "{{ project_name }}.SENTIEON_INSTALL_DIR": "/opt/sentieon-genomics",
  "{{ project_name }}.fasta": "GRCh38.d1.vd1.fa",
  "{{ project_name }}.disk_size": "50",
  "{{ project_name }}.dbsnp_1000G_phase1": "1000G_phase1.snps.high_confidence.hg38.vcf.gz",
  "{{ project_name }}.dbsnp_hapmap": "hapmap_3.3.hg38.vcf.gz",
  "{{ project_name }}.docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/sentieon-genomics:v2018.08.01",
  "{{ project_name }}.dbsnp_Mill": "Mills_and_1000G_gold_standard.indels.hg38.vcf",
  "{{ project_name }}.vcf_index": "{{ vcf_index }}",
  "{{ project_name }}.cluster_config": "OnDemand ecs.sn1ne.4xlarge img-ubuntu-vpc",
  "{{ project_name }}.dbsnp_1000G_omni": "1000G_omni2.5.hg38.vcf.gz",
  "{{ project_name }}.vcf": "{{ vcf }}",
  "{{ project_name }}.sample": "{{ sample }}",
  "{{ project_name }}.dbsnp": "dbsnp_146.hg38.vcf",
  "{{ project_name }}.ref_dir": "oss://chinese-quartet/quartet-storage-data/reference_data/"
}