LUYAO REN
4 年之前
共有 2 個檔案被更改，包括 4 行新增 和 2 行删除
+ 2
- 2
inputs
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| @@ -3,8 +3,8 @@ | |||
| "{{ project_name }}.SENTIEON_INSTALL_DIR": "/opt/sentieon-genomics", | |||
| "{{ project_name }}.fasta": "GRCh38.d1.vd1.fa", | |||
| "{{ project_name }}.BENCHMARKdocker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/rtg-hap:latest", | |||
| "{{ project_name }}.gvcf": "{{ gvcf_list.split(";") | tojson }}", | |||
| "{{ project_name }}.gvcf_idx": "{{ gvcf_idx_list.split(";") | tojson }}", | |||
| "{{ project_name }}.gvcf": {{ gvcf_list.split(";") | tojson }}, | |||
| "{{ project_name }}.gvcf_idx": {{ gvcf_idx_list.split(";") | tojson }}, | |||
| "{{ project_name }}.disk_size": "500", | |||
| "{{ project_name }}.project": "{{ project }}", | |||
| "{{ project_name }}.SMALLcluster_config": "OnDemand bcs.ps.g.xlarge img-ubuntu-vpc", | |||
+ 2
- 0
samples
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| @@ -0,0 +1,2 @@ | |||
| gvcf_list,project,sample_id,gvcf_idx_list | |||
| oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-0/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-1/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-10/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-11/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-2/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-3/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-4/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-5/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-6/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_1_20180518_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-7/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_2_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-8/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_3_20180530_hc.g.vcf;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-9/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_1_20180518_hc.g.vcf,Quartet_DNA_BGI_SEQ2000_BGI_20180530,1,oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-0/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-1/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-10/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-11/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-2/Quartet_DNA_BGI_SEQ2000_BGI_LCL5_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-3/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-4/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-5/Quartet_DNA_BGI_SEQ2000_BGI_LCL6_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-6/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_1_20180518_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-7/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_2_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-8/Quartet_DNA_BGI_SEQ2000_BGI_LCL7_3_20180530_hc.g.vcf.idx;oss://pgx-result/renluyao/manuscript/20200417_gVCF/call-Haplotyper/shard-9/Quartet_DNA_BGI_SEQ2000_BGI_LCL8_1_20180518_hc.g.vcf.idx | |||
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