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@@ -216,10 +216,7 @@ oss://chinese-quartet/quartet-test-data/fastqfiles/Fudan_DNA_LCL5_R1.fastq.gz os |
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oss://choppy-cromwell-result/test-choppy/wgs_quartettest_renluyao_0827/72f269f2-91b7-4fbe-bde7-99b2e1e3091c/call-Haplotyper/Fudan_DNA_LCL7_hc.vcf oss://choppy-cromwell-result/test-choppy/wgs_quartettest_renluyao_0827/7a72d0e6-302d-43ca-b6b0-daeaa0236d06/call-Haplotyper/Fudan_DNA_LCL5_hc.vcf LCL7_LCL5 4891550 11116 11116 |
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``` |
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在获得result.txt之后,jaccard index的计算公式如下 |
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$$ |
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JaccardIndex=\frac{TP}{TP+FP+FN} |
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$$ |
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在获得result.txt之后,jaccard index的计算公式如下 JI = TP/(TP+FP+FN) |
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#### 2. vcfstats.txt |
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