LUYAO REN
4 years ago
1 changed files with 1 additions and 1 deletions
+ 1
- 1
tasks/qualimapBAMqc.wdl
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| @@ -10,7 +10,7 @@ task qualimapBAMqc { | |||
| set -o pipefail | |||
| set -e | |||
| nt=$(nproc) | |||
| /opt/qualimap/qualimap bamqc -bam ${bam} -outformat PDF:HTML -nt $nt -outdir ${bamname}_bamqc --java-mem-size=32G | |||
| /opt/qualimap/qualimap bamqc -bam ${bam} -outformat PDF:HTML -nt $nt -outdir ${bamname}_bamqc --java-mem-size=60G | |||
| tar -zcvf ${bamname}_bamqc_qualimap.zip ${bamname}_bamqc | |||
| >>> | |||
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