LUYAO REN
5 years ago
1 changed files with 1 additions and 1 deletions
+ 1
- 1
tasks/NGScheckMates.wdl
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| @@ -10,7 +10,7 @@ task NGScheckMates { | |||
| set -e | |||
| nt=$(nproc) | |||
| export NCM_HOME=/opt/NGSCheckMate | |||
| python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt -s 0.5 | |||
| python /opt/NGSCheckMate/ncm_fastq.py -l ${input_file} -pt /opt/NGSCheckMate/SNP/SNP.pt -O '.' -p $nt | |||
| >>> | |||
| runtime { | |||
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