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Jaccard_index
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LUYAO REN 5 lat temu
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d14ae79771
commit
1f3666b780
3 zmienionych plików z 202 dodań i 200 usunięć
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  1. +6
    -4
      codescript/rtg_pairs.py
  2. +192
    -192
      codescript/rtg_pairs.txt
  3. +4
    -4
      tasks/jaccard_index.wdl

+ 6
- 4
codescript/rtg_pairs.py Wyświetl plik

@@ -20,6 +20,7 @@ outfile = open('rtg_pairs.txt','w')
for pair in com:
# prepare a
one = pair[0].strip().split('/')
file_a = one[len(one)-1]
a = one[len(one)-1].replace('.normed.vcf.gz','')
strings_a = a.strip().split('_')
sequenceTechA = strings_a[0] + strings_a[1]
@@ -31,6 +32,7 @@ for pair in com:

# prepare b
two = pair[1].strip().split('/')
file_b = two[len(two)-1]
b = two[len(two)-1].replace('.normed.vcf.gz','')
strings_b = b.strip().split('_')
sequenceTechB = strings_b[0] + strings_b[1]
@@ -44,19 +46,19 @@ for pair in com:
## add annotation
# sequencing technology
if (sequenceTechA != sequenceTechB) and (sequenceSiteA == sequenceSiteB) and (sampleA == sampleB):
outline = pair[0] + '\t' + pair[1] + '\t' + folder + '\t' + 'sequenceTech' + '\n'
outline = file_a + '\t' + file_b + '\t' + folder + '\t' + 'sequenceTech' + '\n'
outfile.write(outline)
# sequencing site
elif (sequenceTechA == sequenceTechB) and (sequenceSiteA != sequenceSiteB) and (sampleA == sampleB):
outline = pair[0] + '\t' + pair[1] + '\t' + folder + '\t' + 'sequenceSite' + '\n'
outline = file_a + '\t' + file_b + '\t' + folder + '\t' + 'sequenceSite' + '\n'
outfile.write(outline)
# sample
elif (sequenceTechA == sequenceTechB) and (sequenceSiteA == sequenceSiteB) and (sampleA != sampleB):
outline = pair[0] + '\t' + pair[1] + '\t' + folder + '\t' + 'Sample' + '\n'
outline = file_a + '\t' + file_b + '\t' + folder + '\t' + 'Sample' + '\n'
outfile.write(outline)
# replicate
elif (sequenceTechA == sequenceTechB) and (sequenceSiteA == sequenceSiteB) and (sampleA == sampleB) and (repA != repB):
outline = pair[0] + '\t' + pair[1] + '\t' + folder + '\t' + 'replicate' + '\n'
outline = file_a + '\t' + file_b + '\t' + folder + '\t' + 'replicate' + '\n'
outfile.write(outline)
# analysis site
# elif (sequenceTechA == sequenceTechB) and (sequenceSiteA == sequenceSiteB) and (sampleA == sampleB):

+ 192
- 192
codescript/rtg_pairs.txt Wyświetl plik

@@ -1,192 +1,192 @@
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_BGI_LCL5_2_20180530 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_BGI_LCL5_3_20180530 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_BGI_LCL5_3_20180530 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_1_20190402-BGI_SEQ2000_WGE_LCL5_2_20190402 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328-BGI_SEQ500_BGI_LCL5_2_20180328 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328-BGI_SEQ500_BGI_LCL5_3_20180328 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328-BGI_SEQ500_BGI_LCL5_3_20180328 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_2_20181108 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_3_20181108 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_3_20181108 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_ARD_LCL5_5_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_ARD_LCL5_6_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
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oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_ARD_LCL5_6_20190111 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
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oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
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oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_BRG_LCL5_2_20180930 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_BRG_LCL5_3_20180930 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_BRG_LCL5_2_20180930 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_BRG_LCL5_3_20180930 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_BRG_LCL5_3_20180930 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
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oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_1_20170329 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_2_20170329 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_3_20170329 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_1_20170216 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_2_20170216 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_3_20170216 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_4_20180703 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_5_20180703 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_6_20180703 sequenceTech
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_ARD_LCL5_2_20170403 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_ARD_LCL5_3_20170403 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_ARD_LCL5_3_20170403 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_NVG_LCL5_2_20170329 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_NVG_LCL5_3_20170329 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_NVG_LCL5_3_20170329 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_2_20170216 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_3_20170216 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_3_20170216 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703-ILM_XTen_WUX_LCL5_5_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703-ILM_XTen_WUX_LCL5_6_20180703 replicate
oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz oss://pgx-result/renluyao/high_confidence_call/LCL5/VCF/ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703-ILM_XTen_WUX_LCL5_6_20180703 replicate
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_BGI_LCL5_2_20180530 replicate
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_BGI_LCL5_3_20180530 replicate
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_1_20180518.normed.vcf.gz BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_1_20180518-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_BGI_LCL5_3_20180530 replicate
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_2_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_2_20180530-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ2000_WGE_LCL5_1_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ2000_WGE_LCL5_2_20190402 sequenceSite
BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_1_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_2_20180328 sequenceTech
BGI_SEQ2000_BGI_LCL5_3_20180530.normed.vcf.gz BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ2000_BGI_LCL5_3_20180530-BGI_SEQ500_BGI_LCL5_3_20180328 sequenceTech
BGI_SEQ2000_WGE_LCL5_1_20190402.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_2_20190402.normed.vcf.gz BGI_SEQ2000_WGE_LCL5_1_20190402-BGI_SEQ2000_WGE_LCL5_2_20190402 replicate
BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328-BGI_SEQ500_BGI_LCL5_2_20180328 replicate
BGI_SEQ500_BGI_LCL5_1_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_1_20180328-BGI_SEQ500_BGI_LCL5_3_20180328 replicate
BGI_SEQ500_BGI_LCL5_2_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_3_20180328.normed.vcf.gz BGI_SEQ500_BGI_LCL5_2_20180328-BGI_SEQ500_BGI_LCL5_3_20180328 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_2_20181108 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_3_20181108 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_1_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_1_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_3_20181108 replicate
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_2_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_2_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_4_20190111 replicate
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_5_20190111 replicate
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_ARD_LCL5_6_20190111 replicate
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_3_20181108.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_3_20181108-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_ARD_LCL5_5_20190111 replicate
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_ARD_LCL5_6_20190111 replicate
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_4_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_4_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_ARD_LCL5_6_20190111 replicate
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_5_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_5_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_BRG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_BRG_LCL5_1_20180930 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_BRG_LCL5_2_20180930 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_BRG_LCL5_3_20180930 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_1_20170403 sequenceTech
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_2_20170403 sequenceTech
ILM_Nova_ARD_LCL5_6_20190111.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_Nova_ARD_LCL5_6_20190111-ILM_XTen_ARD_LCL5_3_20170403 sequenceTech
ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_BRG_LCL5_2_20180930 replicate
ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_BRG_LCL5_3_20180930 replicate
ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20171024-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_BRG_LCL5_2_20180930 replicate
ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_BRG_LCL5_3_20180930 replicate
ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_1_20180930.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_1_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_BRG_LCL5_3_20180930 replicate
ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_2_20180930.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_2_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_GAC_LCL5_1_20171025 sequenceSite
ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_BRG_LCL5_3_20180930.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_BRG_LCL5_3_20180930-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025-ILM_Nova_NVG_LCL5_1_20171024 sequenceSite
ILM_Nova_GAC_LCL5_1_20171025.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_GAC_LCL5_1_20171025-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_Nova_WUX_LCL5_1_20171024 sequenceSite
ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_1_20170329 sequenceTech
ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_2_20170329 sequenceTech
ILM_Nova_NVG_LCL5_1_20171024.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_Nova_NVG_LCL5_1_20171024-ILM_XTen_NVG_LCL5_3_20170329 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_1_20170216 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_2_20170216 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_3_20170216 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_4_20180703 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_5_20180703 sequenceTech
ILM_Nova_WUX_LCL5_1_20171024.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_Nova_WUX_LCL5_1_20171024-ILM_XTen_WUX_LCL5_6_20180703 sequenceTech
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_ARD_LCL5_2_20170403 replicate
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_ARD_LCL5_3_20170403 replicate
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_ARD_LCL5_1_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_1_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_ARD_LCL5_3_20170403 replicate
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_ARD_LCL5_2_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_2_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_1_20170329 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_2_20170329 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_NVG_LCL5_3_20170329 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_ARD_LCL5_3_20170403.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_ARD_LCL5_3_20170403-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_NVG_LCL5_2_20170329 replicate
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_NVG_LCL5_3_20170329 replicate
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_NVG_LCL5_1_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_1_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_NVG_LCL5_3_20170329 replicate
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_NVG_LCL5_2_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_2_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_1_20170216 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_2_20170216 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_3_20170216 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_4_20180703 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_5_20180703 sequenceSite
ILM_XTen_NVG_LCL5_3_20170329.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_NVG_LCL5_3_20170329-ILM_XTen_WUX_LCL5_6_20180703 sequenceSite
ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_2_20170216 replicate
ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_3_20170216 replicate
ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
ILM_XTen_WUX_LCL5_1_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_1_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_3_20170216 replicate
ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
ILM_XTen_WUX_LCL5_2_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_2_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_4_20180703 replicate
ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_5_20180703 replicate
ILM_XTen_WUX_LCL5_3_20170216.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_3_20170216-ILM_XTen_WUX_LCL5_6_20180703 replicate
ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703-ILM_XTen_WUX_LCL5_5_20180703 replicate
ILM_XTen_WUX_LCL5_4_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_4_20180703-ILM_XTen_WUX_LCL5_6_20180703 replicate
ILM_XTen_WUX_LCL5_5_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_6_20180703.normed.vcf.gz ILM_XTen_WUX_LCL5_5_20180703-ILM_XTen_WUX_LCL5_6_20180703 replicate

+ 4
- 4
tasks/jaccard_index.wdl Wyświetl plik

@@ -1,7 +1,7 @@
task JI {
File vcf_a
File vcf_b
File dir_name
String vcf_a
String vcf_b
String dir_name
File sdf
File bed
File vcf_dir
@@ -13,7 +13,7 @@ task JI {
set -o pipefail
set -e

/opt/rtg-tools/dist/rtg-tools-3.10.1-4d58ead/rtg vcfeval -b ${vcf_a} -c ${vcf_b} -o ${dir_name} -t ${sdf} --bed-regions=${bed}
/opt/rtg-tools/dist/rtg-tools-3.10.1-4d58ead/rtg vcfeval -b ${vcf_dir}/${vcf_a} -c ${vcf_dir}/${vcf_b} -o ${dir_name} -t ${sdf} --bed-regions=${bed}

>>>


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