filter

inputs

@@ -4,6 +4,7 @@
   "{{ project_name }}.disk_size": "500",
   "{{ project_name }}.ref_fa_fai": "GRCh38.d1.vd1.fa.fai",
   "{{ project_name }}.FBdocker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/freebayes:1.3.1",
+  "{{ project_name }}.half_read_length": "{{ half_read_length }}",
   "{{ project_name }}.cluster_config": "OnDemand bcs.es.c.8xlarge img-ubuntu-vpc",
   "{{ project_name }}.Dedup_bam_index": "{{ Dedup_bam_index }}",
   "{{ project_name }}.sample": "{{ sample }}",

workflow.wdl

@@ -1,7 +1,7 @@
 import "./tasks/Freebayes.wdl" as Freebayes
 
 
-workflow project_name {
+workflow {{ project_name }} {
 
 	String sample
 	String FBdocker