{ "normal_in1":"", "normal_in2":"", "tumor_in1":"", "tumor_in2":"", "sample_id":"", "Seq_platform":"Illumina", "ref_fasta":"", "ref_fasta_dir":"", "docker_fastp":"registry-vpc.cn-shanghai.aliyuncs.com/easygene/fastp:v0.20.1_cv1", "docker_sentieon":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/sentieon-genomics:v202112.05", "docker_qualimap":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/qualimap:2.0.0", "docker_manta":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/manta:v1.6.0", "docker_strelka":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/strelka:v2.9.10", "SENTIEON_LICENSE":"172.25.2.5:8990", "cluster_config":"OnDemand ecs.sn1ne.4xlarge img-ubuntu-vpc", "disk_size":500, "fastqc":false, "annot_gff":"oss://hcc1395/reference_genome/gencode.v36.annotation.gff", "dbsnp_dir":"oss://hcc1395/reference_genome/GRCh38.d1.vd1/", "dbmills_dir":"oss://hcc1395/reference_genome/GRCh38.d1.vd1/", "dbsnp":"dbsnp_146.hg38.vcf", "db_mills":"Mills_and_1000G_gold_standard.indels.hg38.vcf", "regions":"", "interval_padding":"", "bamqc":false, "germline_resource":"oss://hcc1395/reference_genome/gnomAD/af-only-gnomad.v3.1.1.vcf.gz", "germline_resource_tbi":"oss://hcc1395/reference_genome/gnomAD/af-only-gnomad.v3.1.1.vcf.gz.tbi" }