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input: |
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input: |
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in1=tumor_in1, |
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in1=tumor_in1, |
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in2=tumor_in2, |
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in2=tumor_in2, |
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sample_id=sample_id+'_T' |
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sample_id=sample_id+'_T', |
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docker=docker_fastp, |
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docker=docker_fastp, |
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cluster_config=cluster_config, |
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cluster_config=cluster_config, |
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disk_size=disk_size |
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disk_size=disk_size |
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input: |
|
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input: |
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ref_dir=ref_fasta_dir, |
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ref_dir=ref_fasta_dir, |
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dbsnp_dir=dbsnp_dir, |
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dbsnp_dir=dbsnp_dir, |
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dbmills_dirdbmills_dir, |
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dbmills_dir = dbmills_dir, |
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sample_id=sample_id+'_T', |
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sample_id=sample_id+'_T', |
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ref_fasta=ref_fasta, |
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ref_fasta=ref_fasta, |
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dbsnp=dbsnp, |
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dbsnp=dbsnp, |