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"{{ project_name }}.Seq_platform":"{{ Seq_platform }}", |
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"{{ project_name }}.Seq_platform":"{{ Seq_platform }}", |
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"{{ project_name }}.ref_fasta":"{{ ref_fasta }}", |
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"{{ project_name }}.ref_fasta":"{{ ref_fasta }}", |
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"{{ project_name }}.ref_fasta_dir":"{{ ref_fasta_dir }}", |
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"{{ project_name }}.ref_fasta_dir":"{{ ref_fasta_dir }}", |
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"{{ project_name }}.fastqc":{{ fastqc | tojson }}, |
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"{{ project_name }}.fastqc":false, |
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"{{ project_name }}.cluster_config":"{{cluster_config }}", |
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"{{ project_name }}.cluster_config":"{{cluster_config }}", |
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"{{ project_name }}.disk_size":"{{ disk_size }}", |
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"{{ project_name }}.disk_size":"{{ disk_size }}", |
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"{{ project_name }}.docker_fastp":"{{ docker_fastp }}", |
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"{{ project_name }}.docker_fastp":"{{ docker_fastp }}", |
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"{{ project_name }}.db_mills":"{{ db_mills }}", |
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"{{ project_name }}.db_mills":"{{ db_mills }}", |
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"{{ project_name }}.regions":"{{ regions }}", |
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"{{ project_name }}.regions":"{{ regions }}", |
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"{{ project_name }}.interval_padding":"{{ interval_padding }}", |
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"{{ project_name }}.interval_padding":"{{ interval_padding }}", |
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"{{ project_name }}.bamqc":{{ bamqc | tojson}}, |
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"{{ project_name }}.bamqc":false, |
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"{{ project_name }}.germline_resource":"{{ germline_resource }}", |
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"{{ project_name }}.germline_resource":"{{ germline_resource }}", |
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"{{ project_name }}.germline_resource_tbi":"{{ germline_resource_tbi }}", |
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"{{ project_name }}.germline_resource_tbi":"{{ germline_resource_tbi }}", |
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"{{ project_name }}.docker_manta":"{{ docker_manta }}", |
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"{{ project_name }}.docker_manta":"{{ docker_manta }}", |