File normal_bam_bai | File normal_bam_bai | ||||
String ref_fasta | String ref_fasta | ||||
File ref_dir | File ref_dir | ||||
File ref_bed | |||||
String ref_bed | |||||
String sample_id | String sample_id | ||||
File? manta_indel_vcf | File? manta_indel_vcf | ||||
File? manta_indel_vcf_index | File? manta_indel_vcf_index |