@@ -42,5 +42,10 @@ task strelka_calling{ | |||
output{ | |||
File out_file = "${out_dir}.tar" | |||
File indel_vcf = "${out_dir}/results/variants/somatic.indels.vcf.gz" | |||
File indel_vcf_index = "${out_dir}/results/variants/somatic.indels.vcf.gz.tbi" | |||
File snv_vcf = "${out_dir}/results/variants/somatic.snvs.vcf.gz" | |||
File snv_vcf_index = "${out_dir}/results/variants/somatic.snvs.vcf.gz.tbi" | |||
} | |||
} |