@@ -116,7 +116,7 @@ call MSIsensor.MSIsensor as MSIsensor { | |||
call Haplotyper.Haplotyper as Haplotyper { | |||
input: | |||
SENTIEON_LICENSE=SENTIEON_LICENSE, | |||
sample=sample_id + '.N', | |||
sample=sample_id + '_N', | |||
fasta=ref_fasta, | |||
ref_dir=ref_fasta_dir, | |||
recaled_bam=Sentieon_BQSR_normal.recaled_bam, |