更新 'tasks/TNseq.wdl'

tasks/TNseq.wdl

@@ -27,13 +27,13 @@ task sentieon_TNseq{
         export SENTIEON_LICENSE=${SENTIEON_LICENSE}
         nt=$(nproc)
 
-        if [-z "${regions}"]; then
+        if [-z ${regions} ]; then
             INTERVAL="--interval ${regions} --interval_padding ${interval_padding}"
         else:
             INTERVAL=""
         fi
 
-        if [-z "${normal_bam}"];then
+        if [-z ${normal_bam}];then
             INPUT="-i ${tumor_bam} -i ${normal_bam}"
             SAMPLE="--tumor_sample ${tumor_name} --normal_sample ${normal_name}"
         else: