normal_name=sample_id+'_N', | normal_name=sample_id+'_N', | ||||
tumor_recall_data=tumor_recall_data, | tumor_recall_data=tumor_recall_data, | ||||
normal_recall_data=normal_recall_data, | normal_recall_data=normal_recall_data, | ||||
ref_dir=ref_fasta, | |||||
ref_fasta=ref_fasta_dir, | |||||
ref_dir=ref_fasta_dir, | |||||
ref_fasta=ref_fasta, | |||||
dbsnp_dir=dbsnp_dir, | dbsnp_dir=dbsnp_dir, | ||||
dbsnp=dbsnp, | dbsnp=dbsnp, | ||||
docker=docker_sentieon, | docker=docker_sentieon, |