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添加 'defaults'

master
meng 2年前
コミット
0def722d3a
1個のファイルの変更26行の追加0行の削除
  1. +26
    -0
      defaults

+ 26
- 0
defaults ファイルの表示

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{
"Seq_platform":"Illumina",
"ref_fasta":"GRCh38.d1.vd1.fa",
"ref_fasta_dir":"oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
"docker_fastp":"registry-vpc.cn-shanghai.aliyuncs.com/easygene/fastp:v0.20.1_cv1",
"docker_sentieon":"registry-vpc.cn-shanghai.aliyuncs.com/hcc1395_aliyun/sentieon-genomics:v202112.05",
"docker_qualimap":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/qualimap:2.0.0",
"docker_manta":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/manta:v1.6.0",
"docker_strelka":"registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/strelka:v2.9.10",
"SENTIEON_LICENSE":"172.25.2.5:8990",
"cluster_config":"OnDemand ecs.r6.xlarge img-ubuntu-vpc",
"disk_size":"600",
"fastqc":false,
"annot_gff":"oss://hcc1395/reference_genome/gencode.v36.annotation.gff",
"dbsnp_dir":"oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
"dbmills_dir":"oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
"dbsnp":"dbsnp_146.hg38.vcf",
"db_mills":"Mills_and_1000G_gold_standard.indels.hg38.vcf",
"regions":"oss://ivd-product/reference/bed/Dynegene/SureSelectXT_HS_V8_S33266340_hg38_Regions.bed",
"interval_padding":"100",
"bamqc":false,
"germline_resource":"oss://hcc1395/reference_genome/gnomAD/af-only-gnomad.v3.1.1.vcf.gz",
"germline_resource_tbi":"oss://hcc1395/reference_genome/gnomAD/af-only-gnomad.v3.1.1.vcf.gz.tbi"


}

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