File normal_bam | File normal_bam | ||||
File normal_bam_bai | File normal_bam_bai | ||||
String ref_fasta | String ref_fasta | ||||
String ref_bed | |||||
File ref_fasta_dir | File ref_fasta_dir | ||||
String sample_id | String sample_id | ||||
File annotsv_database | File annotsv_database | ||||
normal_bam_bai = normal_bam_bai, | normal_bam_bai = normal_bam_bai, | ||||
ref_fasta = ref_fasta, | ref_fasta = ref_fasta, | ||||
ref_dir = ref_fasta_dir, | ref_dir = ref_fasta_dir, | ||||
ref_bed = ref_bed, | |||||
sample_id = sample_id, | sample_id = sample_id, | ||||
docker = docker_manta, | docker = docker_manta, | ||||
cluster_config = cluster_config, | cluster_config = cluster_config, |