使用fastp对fastq文件进行质控, 使用fastqscreen对污染源进行检测
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  1. {
  2. "{{project_name}}.sample_id": "{{ sample_id }}",
  3. "{{project_name}}.in1":"{{ in1 }}",
  4. "{{project_name}}.in2":"{{ in2 }}",
  5. "{{ project_name }}.cluster_config":"OnDemand ecs.sn1ne.4xlarge img-ubuntu-vpc",
  6. "{{ project_name }}.disk_size":"{{ disk_size }}",
  7. "{{ project_name }}.docker":"registry-vpc.cn-shanghai.aliyuncs.com/easygene/fastp:v0.20.1_cv1"
  8. }