@@ -23,7 +23,7 @@ workflow {{ project_name }} { | |||
File annotsv_database | |||
String docker_annotsv | |||
String docker_sequenza | |||
if (defined(normal_bams) && size(normal_bams) > 0) { | |||
if (defined(inputBams) && size(inputBams) > 0) { | |||
call cnvkit_multi.cnvkit_multi as cnvkit_multi{ | |||
input: | |||
sample_id=sample_id, | |||
@@ -41,7 +41,7 @@ workflow {{ project_name }} { | |||
disk_size=disk_size | |||
} | |||
} | |||
if (!defined(normal_bams)) { | |||
if (!defined(inputBams)) { | |||
call cnvkit.cnvkit as cnvkit{ | |||
input: | |||
sample_id=sample_id, |